Assessing resistance against Alternaria leaf spot in marigold genotypes(Tagetes spp.): A comprehensive in vitro and in vivo study

Authors

  • S Sharma ICAR-Indian Agricultural Research Institute, New Delhi-110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • A Das ICAR-Indian Agricultural Research Institute, New Delhi- 110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • Bharti ICAR-Indian Agricultural Statistics Research Institute (IASRI), New Delhi-110012, India , Indian Agricultural Statistics Research Institute image/svg+xml Author
  • K P Singh ICAR-Indian Agricultural Research Institute, New Delhi-110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • S Panwar ICAR-Indian Agricultural Research Institute, New Delhi-110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • A Talukdar ICAR-Indian Agricultural Research Institute, New Delhi-110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • E Arzoo ICAR-Indian Agricultural Research Institute, New Delhi-110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • A Singh ICAR-Indian Agricultural Research Institute, New Delhi-110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • P Bisht ICAR-Indian Agricultural Research Institute, New Delhi-110012, India , Indian Agricultural Research Institute image/svg+xml Author
  • R Bhatia ICAR-Indian Agricultural Research Institute , Indian Agricultural Research Institute image/svg+xml Author

DOI:

https://doi.org/10.24154/jhs.v20i2.3846

Keywords:

Alternaria, In vitro and in vivo screening, ITS, marigold, pathogenicity

Abstract

Marigold (Tagetes spp.) a member of  the Asteraceae family, is a globally acclaimed flower crop owing to its significant industrial value. The present study devised an effective screening method utilising a dual approach study, both in vitro and in vivo, for identifying potentially resistant genotypes of marigold. Pathogen isolation from infected plants revealed that 7 out of 10 isolates belong to Alternaria, confirming its prevalent association with leaf spots in marigold. Pathogenicity assessment revealed isolate I-3 as the most virulent isolate, and hence, it was subsequently used for the dual screening programme. Molecular characterization of the virulent isolate based on Internal Transcribed Spacer (ITS) region sequencing revealed its 100% homology with previously reported sequences of Alternaria alternata. Potato dextrose agar and Host-extract media (with dextrose) supported rapid mycelial growth and abundant sporulation. Among 60 genotypes of marigold screened under in vitro and in vivo conditions, AMS-48, AMS-123, Pusa Parv, Pusa Utsav and MGO 3 exhibited moderate resistance. At the same time, Pusa Basanti Gainda, Pusa Deep and Tagetes minuta selections were found to be highly susceptible. These findings were consistent under both conditions, validating the screening methods. The moderately resistant genotypes can be pivotal in marigold breeding programs for developing resilient marigold varieties.

Downloads

Download data is not yet available.

Author Biographies

  • S Sharma, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India, Indian Agricultural Research Institute

    Research Scholar, Division of Floriculture and Landscaping, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India

  • A Das, ICAR-Indian Agricultural Research Institute, New Delhi- 110012, India, Indian Agricultural Research Institute

    Senior Scientist, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi- 110012, India

  • Bharti, ICAR-Indian Agricultural Statistics Research Institute (IASRI), New Delhi-110012, India, Indian Agricultural Statistics Research Institute

    Scientist, Division of Sample Surveys, ICAR-Indian Agricultural Statistics Research Institute (IASRI), New Delhi-110012, India

  • K P Singh, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India, Indian Agricultural Research Institute

    Principal Scientist & Professor, Division of Floriculture and Landscaping, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India

  • S Panwar, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India, Indian Agricultural Research Institute

    Scientist (Senior Scale), 

    Division of Floriculture and Landscaping, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India

     

  • A Talukdar, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India, Indian Agricultural Research Institute

    Principal Scientist, Division of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India

  • E Arzoo, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India, Indian Agricultural Research Institute

    Research Scholar, 

    Division of Floriculture and Landscaping, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India

  • A Singh, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India, Indian Agricultural Research Institute

    Research Scholar, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India

  • P Bisht, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India, Indian Agricultural Research Institute

    Research Scholar, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi-110012, India

  • R Bhatia, ICAR-Indian Agricultural Research Institute, Indian Agricultural Research Institute

    Principal Scientist, Division of Floriculture and Landscaping, ICAR-Indian Agricultural Research Institute, New Delhi-110012

References

Akoijam, R. S., & Chandel, S. (2010). Screening of some marigold cultivars (Tagetes erecta and Tagetes patula) for resistance against leaf spot and flower blight caused by Alternaria zinniae Pape. Indian Phytopathology, 63(3), 354–355.

https://epubs.icar.org.in/index.php/IPPJ/article/view/12470

Aktar, M., & Shamsi, S. (2014). Report on Alternaria blight of Tagetes erecta and Tagetes patula caused by Alternaria alternata (Fr.) Keissler. Journal of the Asiatic Society of Bangladesh, Science, 40(1), 133–140.

Doullah, M. A. U., Meah, M. B., & Okazaki, K. (2006). Development of an effective screening method for partial resistance to Alternaria brassicicola (dark leaf spot) in Brassica rapa. European Journal of Plant Pathology, 116, 33–43.

https://doi.org/10.1007/s10658-006-9035-2

Doyle, J. J., & Doyle, J. L. (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin, 19, 11–15.

Gurjar, P., Meena, L., & Verma, A. K. (2019). Diseases of marigold (Tagetes erecta) and their management: A review. International Journal of Advanced Scientific Research and Management, 4(4), 137–144.

Hotchkiss, E. S., & Baxter, L. W. (1983). Pathogenicity of Alternaria tagetica on Tagetes. Plant Disease, 67, 1288–1290.

Kaplan, L. (1960). Historical and ethno-botanical aspects of domestication in Tagetes. Economic Botany, 14, 200–202.

Marchande, N. A., Bhagwat, R. G., Khanvilkar, M. H., Bhagwat, S. R., Desai, S. D., Phondekar, U. R., & Bhave, S. G. (2020). Screening of various varieties, cultivars and hybrids of marigold against Alternaria leaf blight disease caused by Alternaria alternata. Journal of Pharmacognosy and Phytochemistry, 9(1), 664–665.

Mario, O. B., Luis, M. C., Ming, H. L., Juan, M. D., & Gustavo, C. H. (2020). Lutein as a functional food ingredient: Stability and bioavailability. Journal of Functional Foods, 66, Article 103771.

https://doi.org/10.1016/j.jff.2019.103771

McKinney, H. H. (1923). A new system of grading plant diseases. Journal of Agricultural Research, 26, 195–218.

Meena, M., Gupta, S. K., Swapnil, P., Zehra, A., Dubey, M. K., Upadhyay, R. S. (2017). Alternaria toxins: Potential virulence factors and genes related to pathogenesis. Frontiers in Microbiology, 8, Article 1451.

https://doi.org/10.3389/fmicb.2017.01451

Michereff, S. J., Noronha, M. A., Xavier Filha, M. S., Câmara, M. P., & Reis, A. (2012). Survey and prevalence of species causing Alternaria leaf spots on Brassica species in Pernambuco. Horticultura Brasileira, 30, 345–348.

https://doi.org/10.1590/S0102-05362012000200027

Oviedo, M. S., Sturm, M. E., Reynoso, M. M., Chulze, S. N., & Ramírez, M. L. (2013). Toxigenic profile and AFLP variability of Alternaria alternata and Alternaria infectoria occurring in wheat. Brazilian Journal of Microbiology, 44, 447–455.

Park, J., Kim, S., Jo, M., An, S., Kim, Y., Yoon, J., Jeong, M. H., Kim, E. Y., & Choi, J. (2024). Isolation and identification of Alternaria alternata from potato plants affected by leaf spot disease in Korea: Selection of effective fungicides. Journal of Fungi, 10, 53.

https://doi.org/10.3390/jof10010053

Ramjegathesh, R., & Ebenezar, E. G. (2012). Morphological and physiological characters of Alternaria alternata causing leaf blight disease of onion. International Journal of Plant Pathology, 3(2), 34–44.

Rydberg, P. A. (1915). Tagetes. North American Flora, 34, 148–159.

Sharma, G., Kumar, D., Haque, A., Bhat, S. R., Prakash, S., & Chopra, V. L. (2002). Brassica coenospecies: A rich reservoir for genetic resistance to leaf spot caused by Alternaria brassicae. Euphytica, 125, 411–417.

Shinde, M., Narayanaswamy, H., Murali, R., & Nagaraja, H. (2018). Efficacy of different fungicides against Alternaria tagetica causing leaf spot and flower blight of marigold under in vitro conditions. International Journal of Current Microbiology and Applied Sciences, 7(6), 2251–2255.

https://doi.org/10.20546/ijcmas.2018.706.268

Shingne, A. W., Bagade, A. R., Usendi, P. N., & Giri, G. K. (2020). Morphological, cultural and pathological variation of Alternaria alternata causing leaf spot of Niger. International Journal of Current Microbiology and Applied Sciences, 9(9), 3300–3306.

https://doi.org/10.20546/ijcmas.2020.909.410

Turner, B. L., & Nesom, G. L. (1993). Biogeography, diversity, and endangered or threatened status of Mexican Asteraceae. In T. P. Ramamoorthy, R. A. Bye, A. Lot, & J. E. Fa (Eds.), Biological diversity of Mexico: Origins and distribution (pp. 559–575).

Vishwanath, Kolte, S. J., Singh, M. P., & Awasthi, R. P. (1999). Induction of resistance in mustard (Brassica juncea) against Alternaria black spot with an avirulent Alternaria brassicae isolate. European Journal of Plant Pathology, 105, 217–220.

White, T. J., Bruns, T., Lee, S. J., & Taylor, J. W. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR protocols: A guide to methods and applications (pp. 315–322). Academic Press.

https://doi.org/10.1016/0065-2660(90)18021-M

Yang, X. P. (2015). Identification of pear black spot Alternaria sp. and study on molecular mechanism of sand pear disease resistance to pear black spot (Master’s thesis). Wuhan University, Wuhan, China.

Zhu, X. Q., Chen, X. Y., & Guo, L. Y. (2011). Population structure of brown rot fungi on stone fruits in China. Plant Disease, 95, 1284–1291.

Downloads

Published

31-12-2025

Data Availability Statement

None 

Issue

Section

Research Papers

How to Cite

Sharma, S., Das, A., Bharti, Singh, K. P., Panwar, S., Talukdar, A., Arzoo, E., Singh, A., Bisht, P., & Bhatia, R. (2025). Assessing resistance against Alternaria leaf spot in marigold genotypes(Tagetes spp.): A comprehensive in vitro and in vivo study. Journal of Horticultural Sciences, 20(2). https://doi.org/10.24154/jhs.v20i2.3846

Similar Articles

1-10 of 99

You may also start an advanced similarity search for this article.

Most read articles by the same author(s)